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| Gene | |||
| Chromosome: | 2L | Region: | 3063734-3064911 |
| Name: | CASPL2 | Ensembl Gene ID: | ENSANGG00000008206 |
| Description: | caspase long class (dronc ortholog) [Source:Anopheles_symbol;Acc:CASPL2] | ||
| Sequence(s): |
AAAB01008968: 847063-4031074,1-3184012 AAAB01008968_20: 3020295-3070833,1-50539 |
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| Gene Ontology | |||||||||||
| GO term ID | Description | Evidence type | |||||||||
| GO:0006508 | proteolysis | IEA | |||||||||
| GO:0030693 | caspase activity | IEA | |||||||||
| GO:0005515 | protein binding | IEA | |||||||||
| GO:0007291 | sperm individualization | IEA | |||||||||
| GO:0008632 | apoptotic program | IEA | |||||||||
| GO:0035071 | salivary gland cell autophagic cell death | IEA | |||||||||
| GO:0048102 | autophagic cell death | IEA | |||||||||
| GO:0005737 | cytoplasm | IEA | |||||||||
| Orthologues | Chicken: | ENSGALG00000014698 | Ciona: | ENSCING00000003870, ENSCING00000013557 | Dog: | ENSCAFG00000003623 | |||
| Drosophila: | CG8091 | Elegans: | C48D1.2, Y48E1B.13 | Human: | ENSG00000106144 | ||||
| Mouse: | ENSMUSG00000029863 | Rat: | ENSRNOG00000016707 | Tetraodon: | GSTENG00015350001 | ||||
| Xenopus: | ENSXETG00000006978 | Zebrafish: | ENSDARG00000062052 | Cow: | ENSBTAG00000018159, ENSBTAG00000003731 | ||||
| Opposum: | ENSMODG00000001322 | Chimpanzee: | ENSPTRG00000019805 | ||||||
| Transcript(s) / Protein(s) | |||||||||||
| Transcript | Peptide | Best match to | AnoXcel | ||||||||
| ENSANGT ID: Start-End | ENSANGP ID | MMC1 | MMC2 | Affymetrix | GamDetox | ||||||
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00000010695 | 4A3A-AAN-G-12 | 1.6.9 | Ag.2L.1309.0_CDS_at | View data | ||||||
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| BAC(s) and/or BAC ends | ||||||||
| Name | Status | Accession number(s) | In situ | Name | Status | Accession number(s) | In situ | |
| 159G7 | unmapped | BH389053 BH389279 | 161A10 | unmapped | BH393278 BH393286 | |||
| 03H01 | unmapped | AL141236 AL141237 | 137D9 | unmapped | BH368171 BH392560 | |||
| 179I23 | unmapped | BH367423 BH367667 | 16N22 | unmapped | AL148230 AL609150 | |||
| 160O3 | unmapped | BH403979 BH403990 | ||||||
| Microsatellites - loci (within 10kb) | ||||||
| No matches found. | ||||||
| Microsatellites - polymorphisms (within 10kb) | ||||||
| No matches found. | ||||||
| SNPs (within the gene) | ||||||||
| Name | Affected base | Allele | Consequence | Name | Affected base | Allele | Consequence | |
| rs3266091 | 129 | G/A | SYNONYMOUS_CODING | rs3266088 | 210 | A/G | INTRONIC | |
| rs3266086 | 234 | T/G | INTRONIC | rs3266084 | 455 | T/C | SYNONYMOUS_CODING | |
| rs3266082 | 542 | G/C | INTRONIC | rs3266062 | 589 | C/T | SYNONYMOUS_CODING | |
| Displaying 6 out of 10 SNPs found | ||||||||
| ESTs with similarity to the gene (ESTs retrieved from GenBank up to 2006-26-12) | ||||||||
| EST ID | Description | Matching regions EST/Sequence | Matching sequence | |||||
| BM577233 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449712971 5' |
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Browse DNA region | |||||
| BM578989 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449712112 5' |
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Browse DNA region | |||||
| BM578989 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449712112 5' |
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Browse DNA region | |||||
| Displaying 3 out of 343 ESTs found | ||||||||
