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| Gene | |||
| Chromosome: | 3L | Region: | 11509509-11510123 |
| Name: | CASPS13 | Ensembl Gene ID: | ENSANGG00000015623 |
| Description: | caspase short class [Source:Anopheles_symbol;Acc:CASPS13] | ||
| Sequence(s): |
AAAB01008823: 11269789-14662760,1-3392972 AAAB01008823_63: 11472378-11523018,1-50641 |
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| Gene Ontology | |||||||||||
| GO term ID | Description | Evidence type | |||||||||
| GO:0006508 | proteolysis | IEA | |||||||||
| GO:0030693 | caspase activity | IEA | |||||||||
| Orthologues | Drosophila: | CG7863 |
| Transcript(s) / Protein(s) | |||||||||||
| Transcript | Peptide | Best match to | AnoXcel | ||||||||
| ENSANGT ID: Start-End | ENSANGP ID | MMC1 | MMC2 | Affymetrix | GamDetox | ||||||
|
00000018112 | Ag.3L.53.0_CDS_at | View data | ||||||||
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| BAC(s) and/or BAC ends | ||||||||
| Name | Status | Accession number(s) | In situ | Name | Status | Accession number(s) | In situ | |
| 18B07 | consistent (tbc) | AL148938 AL148939 | 26M13 | unmapped | AL153751 AL610968 | |||
| 142E4 | unmapped | BH396789 BH396799 | 131E1 | unmapped | BH369254 BH369261 | |||
| 09F18 | unmapped | AL144806 AL144807 | ||||||
| Microsatellites - loci (within 10kb) | ||||||
| No matches found. | ||||||
| Microsatellites - polymorphisms (within 10kb) | ||||||
| No matches found. | ||||||
| SNPs (within the gene) | ||||||||
| Name | Affected base | Allele | Consequence | Name | Affected base | Allele | Consequence | |
| rs5232522 | 94 | T/G | NON_SYNONYMOUS_CODING | rs5034497 | 164 | C/T | NON_SYNONYMOUS_CODING | |
| rs5231997 | 272 | T/C | INTRONIC | rs5231995 | 275 | A/T | INTRONIC | |
| rs5231727 | 294 | C/T | INTRONIC | rs5231714 | 299 | C/A | INTRONIC | |
| Displaying 6 out of 10 SNPs found | ||||||||
| ESTs with similarity to the gene (ESTs retrieved from GenBank up to 2006-26-12) | ||||||||
| No matches found. | ||||||||
