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| Gene | |||
| Chromosome: | 3L | Region: | 33281980-33283464 |
| Name: | CLIPA1 | Ensembl Gene ID: | ENSANGG00000017773 |
| Description: | Immune-responsive serine protease-related protein ISPR20 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9U455] | ||
| Sequence(s): |
AAAB01008986: 29265189-41963435,1-12698247 AAAB01008986_173: 33280566-33330755,1-50190 |
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| Gene Ontology | |||||||||||
| GO term ID | Description | Evidence type | |||||||||
| GO:0008233 | peptidase activity | IEA | |||||||||
| GO:0004252 | serine-type endopeptidase activity | IEA | |||||||||
| GO:0006508 | proteolysis | IEA | |||||||||
| Orthologues | |||||||||
| No matches found. | |||||||||
| Transcript(s) / Protein(s) | |||||||||||
| Transcript | Peptide | Best match to | AnoXcel | ||||||||
| ENSANGT ID: Start-End | ENSANGP ID | MMC1 | MMC2 | Affymetrix | GamDetox | ||||||
|
00000020262 | 4.1.7 | Ag.3L.6.0_CDS_at | View data | |||||||
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| BAC(s) and/or BAC ends | ||||||||
| Name | Status | Accession number(s) | In situ | Name | Status | Accession number(s) | In situ | |
| 18B07 | consistent (tbc) | AL148938 AL148939 | 20J02 | consistent (tbc) | AL150288 AL150289 | 
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| 26M13 | unmapped | AL153751 AL610968 | 28L20 | unmapped | AL154891 AL611198 | |||
| 19L15 | unmapped | AL149853 AL149854 | ||||||
| Microsatellites - loci (within 10kb) | ||||||
| No matches found. | ||||||
| Microsatellites - polymorphisms (within 10kb) | ||||||
| No matches found. | ||||||
| SNPs (within the gene) | ||||||||
| Name | Affected base | Allele | Consequence | Name | Affected base | Allele | Consequence | |
| rs5333237 | 12 | G/A | NON_SYNONYMOUS_CODING | rs5333257 | 19 | A/G | SYNONYMOUS_CODING | |
| rs5333261 | 21 | C/T | STOP_GAINED | rs5333277 | 28 | C/T | SYNONYMOUS_CODING | |
| rs5333283 | 34 | G/A | SYNONYMOUS_CODING | rs5333746 | 88 | C/A | SYNONYMOUS_CODING | |
| Displaying 6 out of 12 SNPs found | ||||||||
| ESTs with similarity to the gene (ESTs retrieved from GenBank up to 2006-26-12) | ||||||||
| EST ID | Description | Matching regions EST/Sequence | Matching sequence | |||||
| BM575527 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449696916 5' |
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Browse DNA region | |||||
| BM575527 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449696916 5' |
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Browse DNA region | |||||
| BM575527 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449696916 5' |
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Browse DNA region | |||||
| Displaying 3 out of 442 ESTs found | ||||||||
