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| Gene | |||
| Chromosome: | 2L | Region: | 6048236-6053107 |
| Name: | CASPS11 | Ensembl Gene ID: | ENSANGG00000018876 |
| Description: | caspase short class [Source:Anopheles_symbol;Acc:CASPS11] | ||
| Sequence(s): |
AAAB01008948: 5078962-8424705,1-3345744   AAAB01008948_20: 6042129-6092821,1-50693   |
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| Gene Ontology | |||||||||||
| GO term ID | Description | Evidence type | |||||||||
| GO:0008233 | peptidase activity | IEA | |||||||||
| GO:0006508 | proteolysis | IEA | |||||||||
| GO:0008083 | growth factor activity | IEA | |||||||||
| GO:0030693 | caspase activity | IEA | |||||||||
| GO:0016787 | hydrolase activity | IEA | |||||||||
| GO:0008234 | cysteine-type peptidase activity | IEA | |||||||||
| GO:0006508 | proteolysis | IEA | |||||||||
| GO:0008083 | growth factor activity | IEA | |||||||||
| GO:0030693 | caspase activity | IEA | |||||||||
| Transcript(s) / Protein(s) | |||||||||||
| Transcript | Peptide | Best match to | AnoXcel | ||||||||
| ENSANGT ID: Start-End | ENSANGP ID | MMC1 | MMC2 | Affymetrix | GamDetox | ||||||
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00000021365 | NAP1-P45-H-05 | Ag.2L.73.0_CDS_s_at | View data | |||||||
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00000032059 | NAP1-P45-H-05 | Ag.2L.73.0_CDS_s_at | View data | |||||||
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00000032058 | NAP1-P45-H-05 | Ag.2L.73.0_CDS_s_at | View data | |||||||
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00000021362 | NAP1-P45-H-05 | Ag.2L.73.0_CDS_s_at | View data | |||||||
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| BAC(s) and/or BAC ends | ||||||||
| Name | Status | Accession number(s) | In situ | Name | Status | Accession number(s) | In situ | |
| 159G7 | unmapped | BH389053 BH389279 | 16M06 | unmapped | AL148171 AL148172 | |||
| 01L14 | unmapped | AL140232 AL140233 | 12N05 | unmapped | AL146699 AL146700 | |||
| 12L15 | unmapped | AL146642 AL146643 | 153F19 | unmapped | BH403841 BH403848 | |||
| 146F5 | unmapped | BH404647 BH404656 | ||||||
| Microsatellites - loci (within 10kb) | ||||||
| No matches found. | ||||||
| Microsatellites - polymorphisms (within 10kb) | ||||||
| No matches found. | ||||||
| SNPs (within the gene) | ||||||||
| Name | Affected base | Allele | Consequence | Name | Affected base | Allele | Consequence | |
| rs3567555 | 950 | C/T | NON_SYNONYMOUS_CODING | rs3581889 | 2355 | A/- | INTRONIC | |
| rs3581891 | 2383 | T/- | INTRONIC | rs3577283 | 2388 | T/C | INTRONIC | |
| rs5265162 | 2388 | T/C | INTRONIC | rs3577287 | 2707 | G/A | INTRONIC | |
| Displaying 6 out of 10 SNPs found | ||||||||
| ESTs with similarity to the gene (ESTs retrieved from GenBank up to 2006-26-12) | ||||||||
| EST ID | Description | Matching regions EST/Sequence | Matching sequence | |||||
| BM599894 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449708631 5' |
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Browse DNA region | |||||
| BM599894 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449708631 5' |
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Browse DNA region | |||||
| BM599894 | A.Gam.ad.cDNA.blood1 Anopheles gambiae cDNA clone 19600449708631 5' |
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Browse DNA region | |||||
| Displaying 3 out of 14 ESTs found | ||||||||