//req.open("GET", "/example.jsp?date=" + (+new Date), true); var studyId=0; var populationId=0; var csId=0; var assayId=0; var assayResultTypeId=0; var journalTitlesLoaded=0; var journalTitles=new Array(); var alphabet='abcdefghijklmnopqrstuvwxyzABCDEFGHIJKLMNOPQRSTUVWXYZ'; var xmlhttp=false; var divBR=0; var destDivId=""; var divAC=document.getElementById("divAutoComplete"); var resultsTypeId=0; var resultsForm=new Array(); resultsForm[1]='Percent mortality:'; resultsForm[2]='
LC50:LD50:
LC90:LD90:
LC95:LD95:
LC99:LD99:
'; resultsForm[3]='
KDT50:LT50:
KDT90:LT90:
KDT95:LT95:
KDT99:LT99:
'; resultsForm[4]='Score:'; //*********************************** // // Create HTTP object for global use // //*********************************** try { xmlhttp=new ActiveXObject('Msxml2.XMLHTTP'); } catch(e) { try { xmlhttp=new ActiveXObject('Microsoft.XMLHTTP'); } catch(E) { xmlhttp=false; } } if(!xmlhttp && typeof XMLHttpRequest!='undefined') xmlhttp=new XMLHttpRequest(); function getDataFromServer(url) { var response=""; xmlhttp.open("GET",url,false); xmlhttp.send(null); response=xmlhttp.responseText; return response; } //************************************ // // AutoComplete functions // //************************************ function setupAutoCompDiv(tbxObj) { divAC=document.getElementById("divAutoComplete"); var posX=(getXpos(tbxObj)+1); var posY=(getYpos(tbxObj)+23); divAC.style.left=posX; divAC.style.top=posY; divAC.style.visibility="visible"; } function autoComplete(tbxObj,event) { divAC=document.getElementById("divAutoComplete"); setupAutoCompDiv(tbxObj); var newChar=event.which; var tbxValue=tbxObj.value; var tbxId=tbxObj.id; if(newChar==undefined) newChar=event.keyCode; if(newChar==8) { if(tbxValue.length<=1) tbxValue=""; else tbxValue=tbxValue.substr(0,(tbxValue.length-1)); } else tbxValue=tbxValue+String.fromCharCode(newChar); if(tbxValue.length>=2) divAC.innerHTML=getDataFromServer("autoComplete.php?oid="+tbxId+"&q="+tbxValue); else divAC.style.visibility="hidden"; } function setValue(tbxId,id,value) { divAC.style.visibility="hidden"; obj=document.getElementById(tbxId); obj.value=value; tbxId="ac_"+tbxId; obj=document.getElementById(tbxId); obj.value=id; } function getXpos(obj) { var curLeft=0; if(obj.offsetParent) while(obj.offsetParent) { curLeft+=obj.offsetLeft obj=obj.offsetParent; } else if(obj.x) curLeft+=obj.x; return curLeft; } function getYpos(obj) { var curTop=0; if(obj.offsetParent) while(obj.offsetParent) { curTop +=obj.offsetTop obj=obj.offsetParent; } else if(obj.y) curTop +=obj.y; return curTop; } //********************************************** // // Checks if passed string contains letters only // //********************************************** function isAlpha(testString) { if(testString=="") return false; for(i=0;i0) { for(t=0;t=0) id=document.getElementById(objId+t).value; if(id!="") id=objId+"="+id+"&"; return id; } function swapDivContent(div) { if(document.getElementById("cbx"+div).checked) document.getElementById("div_"+div).innerHTML=document.getElementById("div_"+div).value; else document.getElementById("div_"+div).innerHTML=""; } //***************************** // If both the insecticide ddm and af are not blank and not equal show warning message and exit. // Otherwise return the ddm or af value. If ddm is not set then returns af which maybe be blank. //***************************** function getInsecticideId() { ddmInsecticideId=getId("i",6); afInsecticideId="i="+document.getElementById("ac_i").value+"&"; if(ddmInsecticideId!="" && afInsecticideId!="i=&" && ddmInsecticideId!=afInsecticideId) { alert('The insecticide names in the drop down menu and the autofill box are different.'); return -1; } if(ddmInsecticideId!="") return ddmInsecticideId; else return afInsecticideId; } //******************** // // index.php - Search // //******************** function submitSearch() { var dataInputError=0; var query=""; if(document.getElementById("cbxs").checked) { query=getId("s",7); ac_species=document.getElementById("s").value; ac_speciesId=document.getElementById("ac_s").value; if(query!="" && ac_species!="") { alert( "You may use either the drop down menus or the auto complete box."); return; } if(ac_species!="" && ac_speciesId=="") { alert( "Retype the species name and click on the value in the selection list."); return; } if(ac_speciesId!="") query=query+"s="+ac_speciesId+"&"; } if(document.getElementById("cbxl").checked) query=query+getId("l",7); if(document.getElementById("cbxi").checked) { var insecticideId=getInsecticideId(); if(insecticideId!=-1) query=query+getInsecticideId(); else dataInputError=1; } if(document.getElementById("cbxrm").checked) query=query+getId("rm",6); if(document.getElementById("cbxa").checked) query=query+getId("a",6); if(document.getElementById("cbxmu").checked) query=query+getId("mu",5); if(document.getElementById("cbxcm").checked) query=query+getId("cm",5); if(document.getElementById("cbxy").checked) { // Check if the value has changed from the default "----" if(document.getElementById("y").value.search("-")<0) query=query+"&y="+document.getElementById("y").value; if(document.getElementById("y_to").value.search("-")<0) query=query+"&y_to="+document.getElementById("y_to").value; } if(dataInputError==0 && query!="") { query=query+"&sid="+sid; this.window.location="http://anobase.vectorbase.org/ir/search.php?"+query; } } /******************/ // // Study // /******************/ function setPubType() { var isbn=document.getElementById("isbn"); if(document.getElementById("dataSource").value=="2") isbn.disabled=0; else { isbn.disabled=1; isbn.value=""; } } function storeStudy(action) { var ds=document.getElementById("dataSource").value; var medId=document.getElementById("medlineId").value; var name=document.getElementById("dsn").value; var ser=document.getElementById("series").value; var vol=document.getElementById("volume").value; var iss=document.getElementById("issue").value; var pages=document.getElementById("pages").value; var year=document.getElementById("year").value; var auth=document.getElementById("authors").value; var title=document.getElementById("title").value; var isbn=document.getElementById("isbn").value; var com=document.getElementById("comments").value; var comInt=document.getElementById("commentsInternal").value; query="ds="+ds+"&medId="+medId+"&name="+name+"&ser="+ser+"&vol="+vol+"&iss="+iss+"&pages="+pages; query=query+"&year="+year+"&auth="+auth+"&title="+title+"&isbn="+isbn+"&com="+com+"&comInt="+comInt; destDivId="divBR"; if(action=="insert") setDivInnerHtml("addStudy.php?"+query); else { query=query+"&id="+document.getElementById("studyId").value; setDivInnerHtml("editStudy.php?"+query); } } //*************** // // Specimen // //*************** function setEstablishedStrain() { labstr=document.getElementById("ls"); strid=document.getElementById("lsid"); if (labstr.value == "yes") strid.disabled=0; else strid.disabled=1; } function setBankedCollection() { bc=document.getElementById("bc"); bcid=document.getElementById("bcid"); if (bc.value == "yes") bcid.disabled=0; else bcidei.disabled=1; } function storePopulation(action) { var errMsg="" var hid=""; var simid=document.getElementById("simid").value; var n=document.getElementById("n").value; var sex=document.getElementById("sex").value; var fs=document.getElementById("fs").value; var lsid=document.getElementById("lsid").value; var bmid=document.getElementById("bcid").value; var com=document.getElementById("com").value; var comi=document.getElementById("comi").value; var cmid=getId("cm",5); var csid=document.getElementById("ac_cs").value; var s=getId("s",7); if(s=="" && document.getElementById("ac_s").value=="") errMsg="No species name entered."; else if(s=="") s="s="+document.getElementById("ac_s").value+"&"; if(errMsg!="") { alert(errMsg); return; } query="stid="+studyId+"&inv="+userName+"&"+s+"simid="+simid; query=query+"&l="+csid+"&hid="+hid+"&csd="+document.getElementById("csd").value; query=query+"&ced="+document.getElementById("ced").value+"&ct="+document.getElementById("ct").value; query=query+"&temp="+document.getElementById("temp").value+"&n="+n; query=query+"&sex="+sex+"&fs="+fs+"&lsid="+lsid+"&bmid="+bmid+"&com="+com+"&comi="+comi; destDivId="divBR"; if(action=="insert") setDivInnerHtml("addPop.php?"+query); else { query=query+"&pid=0"; setDivInnerHtml("editPop.php?"+query); } } function searchPopulation() { var s=document.getElementById('qryStr').value; var f=document.getElementById('qryFld').value; if(f=="a" || f=="y") { destDivId='divTR'; setDivInnerHtml('viewPop.php?f='+f+'&s='+s); } else { destDivId='divTR'; setDivInnerHtml('viewPop.php?o='+f+'&s='+s); } } //************************ // // Collection site // //************************ var hhForm=''; hhForm=hhForm+''; hhForm=hhForm+''; hhForm=hhForm+''; hhForm=hhForm+''; //hhForm=hhForm+''; //hhForm=hhForm+''; //hhForm=hhForm+''; //hhForm=hhForm+''; //hhForm=hhForm+'
Household Id:
Householder:
Structure type:
Ownerhip:
No. of occupants:
IRS date://
IRS insecticide:
ITN date://
ITN insecticide:'; //hhForm=hhForm+''; //hhForm=hhForm+'
'; var coordFormat=""; var latNmeaHtml=',.'; var latFloatHtml='.'; var lonNmeaHtml=',.'; var lonFloatHtml='.'; function setupNewLocDiv() { divNewLocation=document.getElementById("divNewLocation"); divNewLocation.value=divNewLocation.innerHTML; divNewLocation.innerHTML=""; } function setCoordFormat(format) { var tbxAlias=document.getElementById("alias"); var cbxNmea=document.getElementById("cbxNmea"); var cbxFloat=document.getElementById("cbxFloat"); var divLat=document.getElementById("divLat"); var divLon=document.getElementById("divLon"); if(format=="nmea") { if(!cbxNmea.checked) { divLat.innerHTML=""; divLon.innerHTML=""; } else { cbxNmea.checked=1; cbxFloat.checked=0; divLat.innerHTML=latNmeaHtml; divLon.innerHTML=lonNmeaHtml; } } else { if(!cbxFloat.checked) { divLat.innerHTML=""; divLon.innerHTML=""; } else { cbxNmea.checked=0; cbxFloat.checked=1; divLat.innerHTML=latFloatHtml; divLon.innerHTML=lonFloatHtml; } } } function defineNewLocation() { var cbxNewLocation=document.getElementById("cbxNewLocation"); var divNewLocation=document.getElementById("divNewLocation"); if(cbxNewLocation.checked) divNewLocation.innerHTML=divNewLocation.value; else divNewLocation.innerHTML=""; } function addColSite() { var query="username="+userName; var ontLoc=getId("l",7); var cbxNewLocation=document.getElementById("cbxNewLocation"); var tbxAlias=document.getElementById("alias"); var cbxNmea=document.getElementById("cbxNmea"); var cbxFloat=document.getElementById("cbxFloat"); var divLat=document.getElementById("divLat"); var divLon=document.getElementById("divLon"); if(ontLoc=="" && !cbxNewLocation.checked) { alert("The location of the collection site needs to be defined using either the ontology based drop down menus or by adding a new location."); return; } if(ontLoc=="" && cbxNewLocation.checked) if(document.getElementById("country").value=="") { alert("You need to fill at least a country name."); return; } if(ontLoc!="" && cbxNewLocation.checked) { alert("Use either the ontology based drop down menus or add a new site using the text boxes."); return; } if(cbxFloat.checked) if(document.getElementById("latDeg").value=="" || document.getElementById("latDegTh").value=="" || document.getElementById("latHs").value=="" || document.getElementById("lonDeg").value=="" || document.getElementById("lonDegTh").value=="" || document.getElementById("lonHs").value=="" ) { alert("Site coordinates missing."); return; } if(cbxNmea.checked) if(document.getElementById("latDeg").value=="" || document.getElementById("latMin").value=="" || document.getElementById("latMinTh").value=="" || document.getElementById("latHs").value=="" || document.getElementById("lonDeg").value=="" || document.getElementById("lonMin").value=="" || document.getElementById("lonMinTh").value=="" || document.getElementById("lonHs").value=="" ) { alert("Site coordinates missing."); return; } if(tbxAlias.value!="") query=query+"&alias="+tbxAlias.value; if(ontLoc=="" && cbxNewLocation.checked) { query=query+"&site=new&c="+document.getElementById("country").value+"&p="+document.getElementById("province").value; query=query+"&d="+document.getElementById("district").value+"<n="+document.getElementById("location").value+"&lly="+document.getElementById("locality").value; } else query=query+"&site=ont&"+ontLoc; if(cbxFloat.checked) { lat=document.getElementById("latDeg").value+"."+document.getElementById("latDegTh").value; if(document.getElementById("latHs").value=="S") lat=lat*(-1); lon=document.getElementById("lonDeg").value+"."+document.getElementById("lonDegTh").value; if(document.getElementById("lonHs").value=="W") lon=lon*(-1); query=query+"&lat="+lat+"&lon="+lon; } if(cbxNmea.checked) { tmpStr=+document.getElementById("latMin").value+"."+document.getElementById("latMinTh").value; lat=tmpStr/60+document.getElementById("latDeg").value/1; if(document.getElementById("latHs").value=="S") lat=lat*(-1); tmpStr=+document.getElementById("lonMin").value+"."+document.getElementById("lonMinTh").value; lon=tmpStr/60+document.getElementById("lonDeg").value/1; if(document.getElementById("lonHs").value=="W") lon=lon*(-1); query=query+"&lat="+lat+"&lon="+lon; } /* if(document.getElementById('hyes').checked); { if(document.getElementById('hid').value=="") { alert("A household ID must be set."); return; } query=query+"&hid="+document.getElementById('hid').value+"&hh="+document.getElementById('hh').value+"&str="+document.getElementById('str').value; query=query+"&owp="+document.getElementById('owp').value+"&ocn="+document.getElementById('ocn').value; query=query+"&irsd="+document.getElementById('irsy').value+document.getElementById('irsm').value+document.getElementById('irsd').value; query=query+"&irsi="+document.getElementById('irsi_id').value; query=query+"&itnd="+document.getElementById('itny').value+document.getElementById('itnm').value; query=query+document.getElementById('itnd').value+"&itni="+document.getElementById('itni_id').value; } */ destDivId="divBR"; setDivInnerHtml("addColSite.php?"+query); } function searchColSite() { var qs=document.getElementById('qs').value; var t=document.getElementById('st1').checked; if(t) t="e"; else t="s"; if(qs!="") { destDivId="divTR"; setDivInnerHtml('viewColSite.php?t=l'+t+'&q='+qs); } } function printHouseholdAddForm(csid) { csId=csid; destDivId="divTR"; setDivInnerHtml("addHousehold.php"); } function addHousehold() { var qs="csid="+csId+"&hid="+document.getElementById('hid').value+"&hh="+document.getElementById('hh').value; qs=qs+"&str="+document.getElementById('str').value+"&owp="+document.getElementById('owp').value; qs=qs+"&ocn="+document.getElementById('ocn').value; destDivId="divTR"; setDivInnerHtml("addHousehold.php?"+qs); } // // Assay // function searchAssay() { var str=document.getElementById('qryStr').value; var fld=document.getElementById('qryFld').value; if(str!='' && fld!='') { destDivId='divTR'; setDivInnerHtml('viewAssay.php?f='+fld+'&s='+str); } } function showResultsForm() { var assayMethod=getId("a",6); var destDiv=document.getElementById("divResults"); resultsTypeId=getDataFromServer("getResultsType.php?id="+assayMethod); destDiv.innerHTML=""; destDiv.innerHTML=resultsForm[resultsTypeId]; } function addAssay() { query="pid="+populationId+"&"+getId("a",6)+getId("mu",5)+getId("i",6)+"ic="+document.getElementById("ic").value; query=query+"&n="+document.getElementById("sample_size").value+"&"+getId("rm",6)+"genef="+document.getElementById("genef").value; query=query+"&com="+document.getElementById("com").value+"&comi="+document.getElementById("comp").value; query=query+"&age="+document.getElementById("age").value; switch(resultsTypeId) { case "1": query=query+"&result=Mortality percentage:"+document.getElementById("pm").value; break; case "2": query=query+"&result=LC50:"+document.getElementById("lc50").value+";LC90:"+document.getElementById("lc90").value+";LC95:"+document.getElementById("lc95").value+";LC99:"+document.getElementById("lc99").value; query=query+";LD50:"+document.getElementById("ld50").value+";LD90:"+document.getElementById("ld90").value+";LD95:"+document.getElementById("ld95").value+";LD99:"+document.getElementById("ld99").value; break; case "3": query=query+"&result=KDT50:"+document.getElementById("kdt50").value+";KDT90:"+document.getElementById("kdt90").value+";KDT95:"+document.getElementById("kdt95").value+";KDT99:"+document.getElementById("kdt99").value; query=query+";LT50:"+document.getElementById("lt50").value+";LT90:"+document.getElementById("lt90").value+";LT95:"+document.getElementById("lt95").value+";LT99:"+document.getElementById("lt99").value; break; case "4": query=query+"&result=Mortality percentage:"+document.getElementById("pm").value; break; default: alert('No assay method has been specified or the selected method is not implemented yet.'); return; } destDivId="divBR"; setDivInnerHtml("addAssay.php?"+query); }